Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | SCAB_RS21995 | Not Available | Positive | 5189022 - 5189747 | 26642.0 |
| ssga family sporulation/cell division regulator | SCAB_RS22000 | Not Available | Positive | 5189846 - 5190283 | 16024.1 |
| yibe/f family protein | SCAB_RS22005 | Not Available | Negative | 5190314 - 5191771 | 49517.7 |
| phosphomethylpyrimidine synthase thic | SCAB_RS22010 | Not Available | Positive | 5191992 - 5193836 | 67482.5 |
| vwa domain-containing protein | SCAB_RS22015 | Not Available | Positive | 5193932 - 5195377 | 51307.1 |
| hypothetical protein | SCAB_RS22020 | Not Available | Negative | 5195566 - 5196444 | 30966.4 |
| metallophosphoesterase | SCAB_RS22025 | Not Available | Negative | 5196629 - 5197708 | 38453.8 |
| laci family dna-binding transcriptional regulator | SCAB_RS22030 | Not Available | Negative | 5197924 - 5199036 | 39506.6 |
| histidinol-phosphate transaminase | SCAB_RS22035 | Not Available | Positive | 5199461 - 5200540 | 38622.0 |
| cytochrome ubiquinol oxidase subunit i | SCAB_RS22040 | Not Available | Positive | 5200745 - 5202253 | 55427.8 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |