Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn-dependent nadh-azoreductase | SCAB_RS21615 | Not Available | Positive | 5097867 - 5098520 | 23128.4 |
| beta-l-arabinofuranosidase domain-containing protein | SCAB_RS21620 | Not Available | Negative | 5098583 - 5101393 | 100535.0 |
| Trna-leu | Not Available | Not Available | Positive | 5101842 - 5101925 | Not Available |
| fhaa domain-containing protein | SCAB_RS21630 | Not Available | Positive | 5102413 - 5103255 | 29928.3 |
| fha domain-containing protein | SCAB_RS21635 | Not Available | Positive | 5103266 - 5103790 | 18897.8 |
| stp1/irep family pp2c-type ser/thr phosphatase | SCAB_RS21640 | Not Available | Positive | 5103919 - 5105454 | 54091.2 |
| ftsw/roda/spove family cell cycle protein | SCAB_RS21645 | Not Available | Positive | 5105482 - 5106939 | 50912.2 |
| hypothetical protein | SCAB_RS47385 | Not Available | Positive | 5107056 - 5107196 | 5142.25 |
| hypothetical protein | SCAB_RS47390 | Not Available | Negative | 5107617 - 5107775 | 6046.46 |
| peptidoglycan d,d-transpeptidase ftsi family protein | SCAB_RS21650 | Not Available | Positive | 5110266 - 5111732 | 52092.7 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |