Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| daunorubicin resistance protein drra family abc transporter atp-binding protein | SCAB_RS21515 | Not Available | Positive | 5075420 - 5076451 | 35667.2 |
| abc transporter permease | SCAB_RS21520 | Not Available | Positive | 5076448 - 5077296 | 30945.6 |
| potassium channel family protein | SCAB_RS21525 | Not Available | Negative | 5077358 - 5078449 | 39516.7 |
| molybdopterin molybdotransferase moea | SCAB_RS21530 | Not Available | Negative | 5078562 - 5079917 | 47380.6 |
| duf6457 domain-containing protein | SCAB_RS21535 | Not Available | Negative | 5079914 - 5080807 | 30738.4 |
| dihydrolipoamide acetyltransferase family protein | SCAB_RS21540 | Not Available | Negative | 5080923 - 5082266 | 46626.1 |
| alpha-ketoacid dehydrogenase subunit beta | SCAB_RS21545 | Not Available | Negative | 5082266 - 5083270 | 35778.9 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | SCAB_RS21550 | Not Available | Negative | 5083267 - 5084403 | 40611.8 |
| lrp/asnc family transcriptional regulator | SCAB_RS21555 | Not Available | Positive | 5084593 - 5085078 | 17786.3 |
| tetr/acrr family transcriptional regulator | SCAB_RS21560 | Not Available | Negative | 5085178 - 5085768 | 22188.7 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |