Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | SCAB_RS20775 | Not Available | Positive | 4902666 - 4903874 | 42265.4 |
| response regulator transcription factor | SCAB_RS20780 | Not Available | Positive | 4903871 - 4904641 | 26855.3 |
| serine hydrolase domain-containing protein | SCAB_RS20785 | Not Available | Positive | 4904765 - 4905991 | 42594.5 |
| rieske 2fe-2s domain-containing protein | SCAB_RS20790 | Not Available | Positive | 4906100 - 4907320 | 43938.8 |
| response regulator | SCAB_RS20795 | Not Available | Negative | 4907595 - 4908257 | 23585.8 |
| sensor histidine kinase | SCAB_RS20800 | Not Available | Negative | 4908232 - 4909404 | 42215.2 |
| mmpl family transporter | SCAB_RS20805 | Not Available | Positive | 4909580 - 4911904 | 79168.0 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS45105 | Not Available | Negative | 4911927 - 4912166 | 8138.55 |
| winged helix-turn-helix transcriptional regulator | SCAB_RS20810 | Not Available | Positive | 4912231 - 4912566 | 12314.0 |
| spl family radical sam protein | SCAB_RS20815 | Not Available | Negative | 4912610 - 4913491 | 33211.9 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |