Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuca/nucb deoxyribonuclease domain-containing protein | SCAB_RS20390 | Not Available | Positive | 4824781 - 4825773 | 36989.2 |
| hypothetical protein | SCAB_RS20395 | Not Available | Positive | 4825792 - 4826319 | 19469.4 |
| hypothetical protein | SCAB_RS20400 | Not Available | Positive | 4826397 - 4827173 | 29237.6 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS20405 | Not Available | Positive | 4827284 - 4827691 | 14078.8 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS20410 | Not Available | Negative | 4827690 - 4828240 | 18182.8 |
| winged helix-turn-helix domain-containing protein | SCAB_RS20415 | Not Available | Negative | 4828237 - 4828776 | 20169.0 |
| is5 family transposase | SCAB_RS20420 | Not Available | Positive | 4829113 - 4829919 | 30265.3 |
| hypothetical protein | SCAB_RS45095 | Not Available | Negative | 4829837 - 4830376 | 19034.6 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS20425 | Not Available | Positive | 4830485 - 4831261 | 28166.7 |
| duf6578 domain-containing protein | SCAB_RS20430 | Not Available | Positive | 4831540 - 4831959 | 15338.8 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |