Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS20335 | Not Available | Negative | 4813786 - 4814603 | 27398.5 |
| nadp-dependent oxidoreductase | SCAB_RS20340 | Not Available | Negative | 4814693 - 4815697 | 35753.4 |
| alpha/beta fold hydrolase | SCAB_RS20345 | Not Available | Positive | 4816158 - 4817027 | 31599.9 |
| tetr/acrr family transcriptional regulator | SCAB_RS20350 | Not Available | Negative | 4817085 - 4817657 | 20470.2 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS45080 | Not Available | Negative | 4818175 - 4818611 | 15884.2 |
| hypothetical protein | SCAB_RS48585 | Not Available | Positive | 4818688 - 4819077 | 13833.1 |
| lamin tail domain-containing protein | SCAB_RS20360 | Not Available | Negative | 4819572 - 4820168 | 21566.2 |
| aaa family atpase | SCAB_RS20365 | Not Available | Positive | 4820758 - 4821327 | 20576.2 |
| is5 family transposase | SCAB_RS45945 | Not Available | Positive | 4821824 - 4822632 | 30733.5 |
| para family protein | SCAB_RS20385 | Not Available | Negative | 4823325 - 4824380 | 39057.9 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |