Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional glycosyltransferase 87/phosphatase pap2 family protein | SCAB_RS01305 | Not Available | Negative | 308531 - 310501 | 70591.1 |
| ribosome-inactivating family protein | SCAB_RS01310 | Not Available | Negative | 310571 - 311359 | 28351.2 |
| helix-turn-helix domain-containing protein | SCAB_RS01315 | Not Available | Negative | 311681 - 315412 | 133980.0 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS46160 | Not Available | Positive | 315590 - 315736 | 5794.22 |
| sulfite exporter taue/safe family protein | SCAB_RS01320 | Not Available | Positive | 315840 - 316574 | 24676.1 |
| helix-turn-helix domain-containing protein | SCAB_RS01325 | Not Available | Negative | 317127 - 318116 | 36996.0 |
| hypothetical protein | SCAB_RS01330 | Not Available | Positive | 318510 - 319388 | 30325.3 |
| nad-dependent epimerase/dehydratase family protein | SCAB_RS01335 | Not Available | Negative | 320129 - 321100 | 35393.9 |
| duf3592 domain-containing protein | SCAB_RS01340 | Not Available | Negative | 321324 - 322184 | 30889.8 |
| membrane protein | SCAB_RS01345 | Not Available | Negative | 322263 - 323378 | 38322.8 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |