Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | SCAB_RS19895 | Not Available | Negative | 4716572 - 4717057 | 17027.5 |
| dj-1/pfpi family protein | SCAB_RS19900 | Not Available | Negative | 4717054 - 4717659 | 21305.1 |
| aspartate aminotransferase family protein | SCAB_RS19905 | Not Available | Positive | 4717859 - 4719214 | 48455.5 |
| gntr family transcriptional regulator | SCAB_RS19910 | Not Available | Positive | 4719366 - 4720067 | 25846.6 |
| dolichyl-phosphate beta-glucosyltransferase | SCAB_RS19915 | Not Available | Positive | 4720064 - 4722514 | 87917.9 |
| hypothetical protein | SCAB_RS19920 | Not Available | Positive | 4722613 - 4723263 | 23341.8 |
| duf3303 family protein | SCAB_RS19925 | Not Available | Negative | 4723309 - 4723602 | 10970.2 |
| adenylosuccinate synthase | SCAB_RS19930 | Not Available | Negative | 4723761 - 4725044 | 45971.8 |
| diacylglycerol kinase family protein | SCAB_RS19935 | Not Available | Positive | 4725242 - 4726324 | 36511.5 |
| peptidase inhibitor family i36 protein | SCAB_RS19940 | Not Available | Negative | 4726397 - 4726768 | 12755.6 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |