Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine synthetase a | SCAB_RS19325 | Not Available | Negative | 4564760 - 4565827 | 39135.2 |
| type iv secretory system conjugative dna transfer family protein | SCAB_RS19330 | Not Available | Positive | 4567334 - 4569235 | 70429.3 |
| hypothetical protein | SCAB_RS47355 | Not Available | Negative | 4569489 - 4569662 | 6251.29 |
| hypothetical protein | SCAB_RS19340 | Not Available | Positive | 4569801 - 4569986 | 6363.27 |
| rhs repeat-associated core domain-containing protein | SCAB_RS19345 | Not Available | Negative | 4570978 - 4577385 | 230085.0 |
| lamg-like jellyroll fold domain-containing protein | SCAB_RS19350 | Not Available | Negative | 4577495 - 4580326 | 101148.0 |
| type ii toxin-antitoxin system vapb family antitoxin | SCAB_RS19355 | Not Available | Positive | 4581749 - 4582003 | 9235.89 |
| pin domain nuclease | SCAB_RS19360 | Not Available | Positive | 4582003 - 4582422 | 15894.8 |
| aaa domain-containing protein | SCAB_RS19365 | Not Available | Negative | 4582917 - 4588454 | 201691.0 |
| hypothetical protein | SCAB_RS19375 | Not Available | Positive | 4589000 - 4589830 | 31076.1 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |