Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | SCAB_RS18940 | Not Available | Negative | 4471998 - 4473647 | 55612.9 |
| inorganic diphosphatase | SCAB_RS18945 | Not Available | Positive | 4473727 - 4474215 | 18550.7 |
| threonine/serine thre exporter family protein | SCAB_RS18950 | Not Available | Positive | 4474352 - 4476079 | 59464.9 |
| deda family protein | SCAB_RS18955 | Not Available | Negative | 4476178 - 4477155 | 36029.4 |
| merr family transcriptional regulator | SCAB_RS18960 | Not Available | Negative | 4477344 - 4478105 | 29130.1 |
| helix-turn-helix domain-containing protein | SCAB_RS18965 | Not Available | Negative | 4478535 - 4480691 | 75940.8 |
| glutamate decarboxylase | SCAB_RS18970 | Not Available | Positive | 4480854 - 4482293 | 53026.8 |
| abc transporter permease | SCAB_RS18975 | Not Available | Negative | 4482545 - 4483342 | 28380.4 |
| daunorubicin resistance protein drra family abc transporter atp-binding protein | SCAB_RS18980 | Not Available | Negative | 4483339 - 4484325 | 34979.9 |
| padr family transcriptional regulator | SCAB_RS18985 | Not Available | Negative | 4484448 - 4485089 | 23312.3 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |