Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropteroate synthase | SCAB_RS18890 | Not Available | Positive | 4462625 - 4463491 | 30089.0 |
| nuclear transport factor 2 family protein | SCAB_RS18895 | Not Available | Positive | 4463488 - 4463991 | 18163.9 |
| dihydroneopterin aldolase | SCAB_RS18900 | Not Available | Positive | 4464142 - 4464501 | 12938.4 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | SCAB_RS18905 | Not Available | Positive | 4464498 - 4465109 | 21852.8 |
| duf3180 domain-containing protein | SCAB_RS18910 | Not Available | Positive | 4465175 - 4465660 | 16753.8 |
| gtp cyclohydrolase i fole | SCAB_RS18915 | Not Available | Negative | 4465689 - 4466294 | 22235.9 |
| atp-dependent zinc metalloprotease ftsh | SCAB_RS18920 | Not Available | Negative | 4466490 - 4468505 | 72772.5 |
| hypoxanthine phosphoribosyltransferase | SCAB_RS18925 | Not Available | Negative | 4468684 - 4469244 | 20139.6 |
| trna lysidine(34) synthetase tils | SCAB_RS18930 | Not Available | Negative | 4469340 - 4470506 | 40554.6 |
| zinc-dependent metalloprotease | SCAB_RS18935 | Not Available | Negative | 4470698 - 4471822 | 41305.6 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |