Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sige family rna polymerase sigma factor | SCAB_RS18740 | Not Available | Positive | 4429649 - 4430200 | 21066.0 |
| hypothetical protein | SCAB_RS18745 | Not Available | Positive | 4430188 - 4430877 | 23743.2 |
| two-component system response regulator cseb | SCAB_RS18750 | Not Available | Positive | 4430960 - 4431667 | 25382.5 |
| two-component system sensor histidine kinase csec | SCAB_RS18755 | Not Available | Positive | 4431683 - 4433089 | 49772.9 |
| mdr family mfs transporter | SCAB_RS18760 | Not Available | Negative | 4433309 - 4434922 | 55537.1 |
| tetr/acrr family transcriptional regulator | SCAB_RS18765 | Not Available | Positive | 4435091 - 4435750 | 24455.1 |
| hypothetical protein | SCAB_RS18770 | Not Available | Positive | 4435821 - 4436009 | 6928.25 |
| m23 family metallopeptidase | SCAB_RS18775 | Not Available | Negative | 4436037 - 4436639 | 19943.8 |
| atp-dependent clp protease atp-binding subunit | SCAB_RS18780 | Not Available | Negative | 4437138 - 4439663 | 92889.6 |
| sco3374 family protein | SCAB_RS18785 | Not Available | Positive | 4440127 - 4440783 | 22332.9 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |