Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fg-gap-like repeat-containing protein | SCAB_RS01160 | Not Available | Negative | 276655 - 278082 | 47613.8 |
| zip family metal transporter | SCAB_RS01165 | Not Available | Negative | 278388 - 279149 | 25102.7 |
| hypothetical protein | SCAB_RS47235 | Not Available | Positive | 279506 - 279655 | 5123.36 |
| hypothetical protein | SCAB_RS47240 | Not Available | Positive | 279665 - 279823 | 5585.56 |
| fad-dependent oxidoreductase | SCAB_RS01170 | Not Available | Negative | 279820 - 280950 | 40131.9 |
| tetr family transcriptional regulator | SCAB_RS01175 | Not Available | Positive | 281071 - 281661 | 21115.5 |
| hypothetical protein | SCAB_RS01180 | Not Available | Negative | 281649 - 281921 | 8957.79 |
| alpha/beta fold hydrolase | SCAB_RS01185 | Not Available | Negative | 282034 - 282915 | 30972.3 |
| yihy/virulence factor brkb family protein | SCAB_RS01190 | Not Available | Negative | 283042 - 284172 | 40500.5 |
| tetr/acrr family transcriptional regulator | SCAB_RS01195 | Not Available | Negative | 284208 - 284852 | 23093.7 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |