Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii synthase | SCAB_RS18550 | Not Available | Negative | 4382433 - 4384184 | 60581.8 |
| hydroxymethylbilane synthase | SCAB_RS18555 | Not Available | Negative | 4384181 - 4385149 | 33676.4 |
| glutamyl-trna reductase | SCAB_RS18560 | Not Available | Negative | 4385146 - 4386909 | 61564.4 |
| redox-sensing transcriptional repressor rex | SCAB_RS18565 | Not Available | Negative | 4386906 - 4387661 | 26002.0 |
| glutaredoxin family protein | SCAB_RS18570 | Not Available | Negative | 4387979 - 4388266 | 10809.0 |
| had family hydrolase | SCAB_RS18575 | Not Available | Positive | 4388464 - 4389399 | 33700.1 |
| ecf subfamily rna polymerase sigma factor, bldn family | SCAB_RS18580 | Not Available | Positive | 4389786 - 4390562 | 28236.4 |
| duf5667 domain-containing protein | SCAB_RS18585 | Not Available | Positive | 4390847 - 4392082 | 42747.8 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS46375 | Not Available | Negative | 4392257 - 4392352 | 3852.82 |
| lysophospholipid acyltransferase family protein | SCAB_RS18590 | Not Available | Negative | 4392456 - 4393535 | 39468.7 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |