Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS48190 | Not Available | Negative | 269736 - 270249 | 18027.5 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS48195 | Not Available | Positive | 270437 - 270541 | 3863.63 |
| hypothetical protein | SCAB_RS01125 | Not Available | Negative | 270571 - 271212 | 23444.9 |
| hypothetical protein | SCAB_RS01130 | Not Available | Positive | 271505 - 271903 | 13872.9 |
| hypothetical protein | SCAB_RS47230 | Not Available | Negative | 272287 - 272574 | 10867.9 |
| hypothetical protein | SCAB_RS01140 | Not Available | Negative | 273125 - 273376 | 8790.64 |
| hypothetical protein | SCAB_RS47940 | Not Available | Negative | 273512 - 273655 | 5015.13 |
| mfs transporter | SCAB_RS01145 | Not Available | Negative | 273661 - 274917 | 41450.1 |
| fad-dependent oxidoreductase | SCAB_RS44325 | Not Available | Negative | 275029 - 276174 | 39746.1 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS46150 | Not Available | Positive | 276350 - 276511 | 6205.35 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |