Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | SCAB_RS17995 | Not Available | Positive | 4265054 - 4267870 | 99627.9 |
| duf5959 family protein | SCAB_RS18000 | Not Available | Negative | 4267901 - 4268329 | 15802.8 |
| dna helicase recq | SCAB_RS18005 | Not Available | Negative | 4268381 - 4270444 | 74172.9 |
| nadh-quinone oxidoreductase subunit nuon | SCAB_RS18010 | Not Available | Negative | 4270734 - 4272383 | 56909.4 |
| nadh-quinone oxidoreductase subunit m | SCAB_RS18015 | Not Available | Negative | 4272380 - 4273951 | 56132.6 |
| nadh-quinone oxidoreductase subunit l | SCAB_RS18020 | Not Available | Negative | 4273957 - 4275852 | 67336.2 |
| nadh-quinone oxidoreductase subunit nuok | SCAB_RS18025 | Not Available | Negative | 4275868 - 4276167 | 10719.5 |
| nadh-quinone oxidoreductase subunit j | SCAB_RS18030 | Not Available | Negative | 4276164 - 4277015 | 29780.4 |
| nadh-quinone oxidoreductase subunit nuoi | SCAB_RS18035 | Not Available | Negative | 4277012 - 4277653 | 23624.6 |
| nadh-quinone oxidoreductase subunit nuoh | SCAB_RS18040 | Not Available | Negative | 4277646 - 4279010 | 50379.9 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |