Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuoi/complex i 23 kda subunit family protein | SCAB_RS17795 | Not Available | Negative | 4219633 - 4220211 | 21310.3 |
| complex i subunit 1/nuoh family protein | SCAB_RS17800 | Not Available | Negative | 4220214 - 4221182 | 34634.2 |
| nadh-quinone oxidoreductase subunit c | SCAB_RS17805 | Not Available | Negative | 4221179 - 4222726 | 53424.9 |
| nadh-quinone oxidoreductase subunit b | SCAB_RS17810 | Not Available | Negative | 4222723 - 4223403 | 23979.0 |
| nadh-quinone oxidoreductase subunit a | SCAB_RS17815 | Not Available | Negative | 4223394 - 4223813 | 15134.5 |
| sensor histidine kinase | SCAB_RS17820 | Not Available | Positive | 4224103 - 4225323 | 43690.0 |
| sensor histidine kinase | SCAB_RS17825 | Not Available | Positive | 4225525 - 4226856 | 47316.4 |
| response regulator transcription factor | SCAB_RS17830 | Not Available | Positive | 4227209 - 4227868 | 23700.6 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | SCAB_RS17835 | Not Available | Positive | 4228185 - 4230122 | 69382.2 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | SCAB_RS17840 | Not Available | Positive | 4230115 - 4231176 | 38384.6 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |