Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | SCAB_RS17245 | Not Available | Positive | 4117906 - 4118829 | 33354.9 |
| carbohydrate abc transporter permease | SCAB_RS17250 | Not Available | Positive | 4118834 - 4119739 | 32217.0 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | SCAB_RS17255 | Not Available | Positive | 4119797 - 4122082 | 81135.4 |
| duf397 domain-containing protein | SCAB_RS17260 | Not Available | Negative | 4122089 - 4122340 | 8963.28 |
| helix-turn-helix domain-containing protein | SCAB_RS17265 | Not Available | Negative | 4122337 - 4123185 | 31118.3 |
| ph domain-containing protein | SCAB_RS17270 | Not Available | Positive | 4123304 - 4124047 | 27217.1 |
| hypothetical protein | SCAB_RS17275 | Not Available | Negative | 4123995 - 4124255 | 10005.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | SCAB_RS17280 | Not Available | Negative | 4124252 - 4125349 | 38251.6 |
| ribosomal protein s18-alanine n-acetyltransferase | SCAB_RS17285 | Not Available | Negative | 4125354 - 4125854 | 18615.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | SCAB_RS17290 | Not Available | Negative | 4125851 - 4126516 | 22765.3 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |