Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-dependent alcohol dehydrogenase family protein | SCAB_RS01030 | Not Available | Negative | 249288 - 250310 | 36027.1 |
| helix-turn-helix transcriptional regulator | SCAB_RS01035 | Not Available | Positive | 250433 - 251374 | 34559.9 |
| helix-turn-helix transcriptional regulator | SCAB_RS01040 | Not Available | Negative | 251474 - 252364 | 33251.2 |
| mfs transporter | SCAB_RS01045 | Not Available | Positive | 252499 - 253779 | 42411.9 |
| zinc-dependent alcohol dehydrogenase family protein | SCAB_RS01050 | Not Available | Positive | 253852 - 254895 | 36252.3 |
| hypothetical protein | SCAB_RS47935 | Not Available | Positive | 255471 - 255728 | 8889.72 |
| peptidoglycan-binding domain-containing protein | SCAB_RS01060 | Not Available | Negative | 256076 - 256486 | 14113.8 |
| helix-turn-helix domain-containing protein | SCAB_RS01065 | Not Available | Positive | 256815 - 257642 | 29673.0 |
| helix-turn-helix domain-containing protein | SCAB_RS01070 | Not Available | Positive | 257635 - 258522 | 31746.2 |
| hypothetical protein | SCAB_RS01075 | Not Available | Positive | 258731 - 259189 | 16615.2 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |