Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SCAB_RS16800 | Not Available | Positive | 4004459 - 4004866 | 14682.1 |
| thiol-disulfide oxidoreductase dcc family protein | SCAB_RS16805 | Not Available | Positive | 4004863 - 4005381 | 18385.9 |
| tetr family transcriptional regulator | SCAB_RS16810 | Not Available | Positive | 4005391 - 4006197 | 29672.3 |
| atp-binding protein | SCAB_RS16815 | Not Available | Negative | 4006358 - 4006750 | 14418.1 |
| abc transporter substrate-binding protein | SCAB_RS16820 | Not Available | Negative | 4006867 - 4008420 | 56492.6 |
| metallophosphoesterase | SCAB_RS16825 | Not Available | Negative | 4008614 - 4010014 | 48943.8 |
| sco4848 family membrane protein | SCAB_RS48490 | Not Available | Negative | 4010031 - 4010273 | 8925.99 |
| d-alanyl-d-alanine carboxypeptidase family protein | SCAB_RS16835 | Not Available | Positive | 4010401 - 4011690 | 44114.2 |
| yihy/virulence factor brkb family protein | SCAB_RS16840 | Not Available | Negative | 4011853 - 4012722 | 30839.0 |
| decaprenyl-phosphate phosphoribosyltransferase | SCAB_RS16845 | Not Available | Negative | 4012847 - 4013788 | 33507.5 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |