Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-2,8-polysialyltransferase family protein | SCAB_RS16615 | Not Available | Positive | 3954020 - 3955354 | 48247.4 |
| acyltransferase family protein | SCAB_RS16620 | Not Available | Positive | 3955363 - 3956523 | 41960.1 |
| class i sam-dependent methyltransferase | SCAB_RS16625 | Not Available | Positive | 3956807 - 3957649 | 31091.1 |
| tetr/acrr family transcriptional regulator c-terminal domain-containing protein | SCAB_RS16630 | Not Available | Negative | 3957837 - 3958523 | 25020.9 |
| fad-dependent oxidoreductase | SCAB_RS16635 | Not Available | Positive | 3958597 - 3960096 | 52680.4 |
| is630 family transposase | SCAB_RS16640 | Not Available | Positive | 3960198 - 3961283 | 40700.0 |
| leucine efflux protein leue | SCAB_RS16645 | Not Available | Negative | 3961280 - 3961933 | 22861.2 |
| leucine-rich repeat domain-containing protein | SCAB_RS16650 | Not Available | Positive | 3962065 - 3962988 | 33561.5 |
| cor domain-containing protein | SCAB_RS43760 | Not Available | Positive | 3963006 - 3965324 | 87536.3 |
| methylmalonyl-coa mutase | SCAB_RS16655 | Not Available | Negative | 3965342 - 3966922 | 57492.4 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |