Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/isomerase family protein | SCAB_RS16375 | Not Available | Negative | 3898673 - 3899506 | 29036.7 |
| hypothetical protein | SCAB_RS16380 | Not Available | Positive | 3899831 - 3900637 | 26243.5 |
| adenylate/guanylate cyclase domain-containing protein | SCAB_RS16385 | Not Available | Negative | 3900717 - 3901880 | 41837.6 |
| biotin--[acetyl-coa-carboxylase] ligase | SCAB_RS16390 | Not Available | Negative | 3902132 - 3903019 | 30757.5 |
| acyl-coa carboxylase subunit beta | SCAB_RS16395 | Not Available | Positive | 3903326 - 3904933 | 57925.8 |
| acyl-coa carboxylase epsilon subunit | SCAB_RS16400 | Not Available | Positive | 3904951 - 3905160 | 7239.59 |
| morphogenic membrane protein mmpb | SCAB_RS49050 | Not Available | Positive | 3905233 - 3905361 | 4784.15 |
| nucleoside triphosphate pyrophosphatase | SCAB_RS16405 | Not Available | Positive | 3905719 - 3906339 | 21284.3 |
| hypothetical protein | SCAB_RS16410 | Not Available | Negative | 3906387 - 3906881 | 16392.5 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | SCAB_RS16415 | Not Available | Positive | 3907275 - 3909047 | 62269.9 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |