Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor grea | SCAB_RS16275 | Not Available | Positive | 3875203 - 3875703 | 17869.7 |
| threonine ammonia-lyase | SCAB_RS16280 | Not Available | Negative | 3875809 - 3877038 | 42553.5 |
| marr family winged helix-turn-helix transcriptional regulator | SCAB_RS16285 | Not Available | Positive | 3877203 - 3877697 | 17783.4 |
| sigma factor-like helix-turn-helix dna-binding protein | SCAB_RS16290 | Not Available | Positive | 3877796 - 3878287 | 18056.9 |
| hypothetical protein | SCAB_RS16295 | Not Available | Positive | 3878284 - 3878532 | 9151.35 |
| cystathionine gamma-synthase | SCAB_RS16300 | Not Available | Negative | 3878709 - 3879863 | 40559.2 |
| hypothetical protein | SCAB_RS16305 | Not Available | Positive | 3879998 - 3881116 | 40800.7 |
| m48 family metallopeptidase | SCAB_RS16310 | Not Available | Positive | 3881294 - 3882934 | 58454.2 |
| hypothetical protein | SCAB_RS16315 | Not Available | Positive | 3882931 - 3884037 | 40405.6 |
| peptide-methionine (s)-s-oxide reductase msra | SCAB_RS16320 | Not Available | Negative | 3884096 - 3884608 | 19190.3 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |