Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SCAB_RS46990 | Not Available | Positive | 3709825 - 3710196 | 13345.8 |
| hypothetical protein | SCAB_RS47295 | Not Available | Positive | 3710268 - 3710438 | 6367.5 |
| hypothetical protein | SCAB_RS15560 | Not Available | Positive | 3710428 - 3711345 | 33309.7 |
| hypothetical protein | SCAB_RS15565 | Not Available | Positive | 3711559 - 3712338 | 28006.2 |
| hypothetical protein | SCAB_RS43750 | Not Available | Positive | 3712418 - 3713569 | 42384.2 |
| hypothetical protein | SCAB_RS15575 | Not Available | Positive | 3713716 - 3714273 | 19837.6 |
| hypothetical protein | SCAB_RS15580 | Not Available | Positive | 3714264 - 3714956 | 25796.0 |
| hypothetical protein | SCAB_RS15585 | Not Available | Positive | 3714953 - 3715501 | 19306.8 |
| hypothetical protein | SCAB_RS15590 | Not Available | Positive | 3715568 - 3716140 | 20517.1 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS15595 | Not Available | Positive | 3716190 - 3716747 | 20384.9 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |