Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class iv family protein | SCAB_RS15140 | Not Available | Negative | 3623531 - 3624322 | 28140.8 |
| atp-binding protein | SCAB_RS15145 | Not Available | Positive | 3624541 - 3624975 | 15544.5 |
| duf6415 family natural product biosynthesis protein | SCAB_RS15150 | Not Available | Positive | 3625463 - 3626128 | 24462.1 |
| luxr c-terminal-related transcriptional regulator | SCAB_RS15155 | Not Available | Positive | 3626442 - 3626933 | 17402.8 |
| protein-l-isoaspartate o-methyltransferase family protein | SCAB_RS15160 | Not Available | Positive | 3626930 - 3628099 | 42318.4 |
| sam-dependent methyltransferase | SCAB_RS15165 | Not Available | Positive | 3628089 - 3628931 | 30371.8 |
| methyltransferase, fxld system | SCAB_RS15170 | Not Available | Positive | 3629681 - 3630922 | 44933.2 |
| fxld family lanthipeptide | SCAB_RS44850 | Not Available | Positive | 3630960 - 3631130 | 5883.79 |
| lantibiotic dehydratase | SCAB_RS15175 | Not Available | Positive | 3631218 - 3634346 | 114475.0 |
| lanthionine synthetase c family protein | SCAB_RS15180 | Not Available | Positive | 3634343 - 3635575 | 44164.1 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |