Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS48435 | Not Available | Negative | 3612331 - 3612588 | 9373.07 |
| 4-nitrotryptophan synthase | SCAB_RS15095 | Not Available | Positive | 3613916 - 3615136 | 44785.5 |
| nitric oxide synthase oxygenase | SCAB_RS15100 | Not Available | Positive | 3615200 - 3616372 | 43699.7 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS15105 | Not Available | Negative | 3616706 - 3617157 | 16256.8 |
| hypothetical protein | SCAB_RS15110 | Not Available | Negative | 3617139 - 3617423 | 10472.1 |
| tyrosine-type recombinase/integrase | SCAB_RS48440 | Not Available | Negative | 3617834 - 3619057 | 46038.2 |
| helix-turn-helix domain-containing protein | SCAB_RS15120 | Not Available | Negative | 3619118 - 3619300 | 6971.36 |
| divalent-cation tolerance protein cuta | SCAB_RS15125 | Not Available | Positive | 3620559 - 3620882 | 12044.1 |
| helix-turn-helix transcriptional regulator | SCAB_RS15130 | Not Available | Negative | 3620941 - 3622182 | 44622.3 |
| sumf1/egtb/pvdo family nonheme iron enzyme | SCAB_RS15135 | Not Available | Negative | 3622592 - 3623515 | 33903.5 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |