Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | SCAB_RS15005 | Not Available | Positive | 3582727 - 3584676 | 71444.6 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | SCAB_RS15010 | Not Available | Positive | 3584673 - 3585449 | 28947.7 |
| hypothetical protein | SCAB_RS15015 | Not Available | Positive | 3585613 - 3587505 | 65537.9 |
| spoiie family protein phosphatase | SCAB_RS15020 | Not Available | Negative | 3587533 - 3590394 | 101772.0 |
| atp-binding protein | SCAB_RS15025 | Not Available | Negative | 3590739 - 3591146 | 14241.9 |
| (deoxy)nucleoside triphosphate pyrophosphohydrolase | SCAB_RS15030 | Not Available | Negative | 3591450 - 3591854 | 14875.6 |
| spor domain-containing protein | SCAB_RS15035 | Not Available | Negative | 3591898 - 3592104 | 7641.77 |
| gntr family transcriptional regulator | SCAB_RS15040 | Not Available | Negative | 3592475 - 3593227 | 27173.7 |
| duf4190 domain-containing protein | SCAB_RS15045 | Not Available | Negative | 3593375 - 3594577 | 42302.0 |
| threonine synthase | SCAB_RS15050 | Not Available | Positive | 3594870 - 3595979 | 38532.3 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |