Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | SCAB_RS14455 | Not Available | Negative | 3456997 - 3457620 | 21917.3 |
| histidinol-phosphatase | SCAB_RS14460 | Not Available | Positive | 3457947 - 3458747 | 28887.1 |
| cyclic nucleotide-binding/cbs domain-containing protein | SCAB_RS14465 | Not Available | Positive | 3458934 - 3459368 | 15301.4 |
| fur family transcriptional regulator | SCAB_RS14470 | Not Available | Positive | 3459418 - 3459837 | 15446.5 |
| Trna-met | Not Available | Not Available | Positive | 3459933 - 3460006 | Not Available |
| tetratricopeptide repeat protein | SCAB_RS14480 | Not Available | Negative | 3460062 - 3462080 | 71771.1 |
| Trna-met | Not Available | Not Available | Positive | 3462253 - 3462326 | Not Available |
| upf0182 family protein | SCAB_RS14490 | Not Available | Negative | 3462380 - 3465379 | 109201.0 |
| ppa1309 family protein | SCAB_RS14495 | Not Available | Positive | 3465543 - 3466085 | 19384.9 |
| pdz domain-containing protein | SCAB_RS14500 | Not Available | Negative | 3466177 - 3467274 | 38196.7 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |