Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SCAB_RS14405 | Not Available | Negative | 3449475 - 3449816 | 11572.8 |
| hypothetical protein | SCAB_RS14410 | Not Available | Positive | 3450012 - 3450377 | 13021.9 |
| mycothiol system anti-sigma-r factor | SCAB_RS14415 | Not Available | Negative | 3450469 - 3450783 | 11680.7 |
| rna polymerase sigma factor sigr | SCAB_RS14420 | Not Available | Negative | 3450780 - 3451451 | 24839.9 |
| alpha/beta family hydrolase | SCAB_RS14425 | Not Available | Negative | 3451720 - 3452379 | 22578.0 |
| sos response-associated peptidase | SCAB_RS14430 | Not Available | Negative | 3452381 - 3453196 | 30639.2 |
| m50 family metallopeptidase | SCAB_RS14435 | Not Available | Positive | 3453307 - 3454029 | 25187.2 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SCAB_RS14440 | Not Available | Positive | 3454151 - 3455482 | 46063.9 |
| ribosome small subunit-dependent gtpase a | SCAB_RS14445 | Not Available | Positive | 3455499 - 3456512 | 36756.7 |
| dmt family transporter | SCAB_RS14450 | Not Available | Positive | 3456641 - 3456964 | 11087.0 |
Pathways
398 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |