Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| family 2 encapsulin nanocompartment cargo protein polyprenyl transferase | SCAB_RS14255 | Not Available | Negative | 3416298 - 3417527 | 42454.2 |
| family 2b encapsulin nanocompartment shell protein | SCAB_RS14260 | Not Available | Negative | 3417606 - 3419012 | 52019.8 |
| n-acetylmuramoyl-l-alanine amidase | SCAB_RS14265 | Not Available | Positive | 3419309 - 3419899 | 21727.8 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | SCAB_RS14270 | Not Available | Positive | 3419988 - 3420920 | 32959.6 |
| na+/h+ antiporter | SCAB_RS14275 | Not Available | Negative | 3420936 - 3422531 | 57333.4 |
| ubp-type zinc finger domain-containing protein | SCAB_RS14280 | Not Available | Positive | 3422592 - 3422852 | 9575.4 |
| hypothetical protein | SCAB_RS14285 | Not Available | Positive | 3423189 - 3423602 | 14199.9 |
| rna polymerase sigma factor sigf | SCAB_RS14290 | Not Available | Positive | 3423599 - 3424765 | 42500.5 |
| hypothetical protein | SCAB_RS14295 | Not Available | Negative | 3424792 - 3425244 | 15066.6 |
| diacylglycerol/lipid kinase family protein | SCAB_RS14300 | Not Available | Positive | 3425366 - 3426337 | 34920.8 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |