Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclease-related domain-containing protein | SCAB_RS14005 | Not Available | Negative | 3363996 - 3364799 | 29372.5 |
| dual specificity protein phosphatase family protein | SCAB_RS14010 | Not Available | Positive | 3364904 - 3365416 | 18779.5 |
| hypothetical protein | SCAB_RS14015 | Not Available | Positive | 3365638 - 3366399 | 26352.0 |
| sensor histidine kinase | SCAB_RS14020 | Not Available | Positive | 3366396 - 3367676 | 44790.7 |
| sh3 domain-containing protein | SCAB_RS14025 | Not Available | Positive | 3367937 - 3368293 | 12555.2 |
| ftsw/roda/spove family cell cycle protein | SCAB_RS14030 | Not Available | Positive | 3368337 - 3369752 | 48990.1 |
| penicillin-binding transpeptidase domain-containing protein | SCAB_RS14035 | Not Available | Positive | 3369749 - 3371212 | 51162.4 |
| duf3291 domain-containing protein | SCAB_RS14040 | Not Available | Positive | 3371316 - 3371804 | 17868.2 |
| hypothetical protein | SCAB_RS14045 | Not Available | Negative | 3371833 - 3372663 | 29288.2 |
| aurf n-oxygenase family protein | SCAB_RS14050 | Not Available | Positive | 3372835 - 3373791 | 36416.8 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |