Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SCAB_RS13785 | Not Available | Negative | 3312546 - 3313253 | 24728.4 |
| hypothetical protein | SCAB_RS13790 | Not Available | Negative | 3313250 - 3314326 | 38734.9 |
| vwa domain-containing protein | SCAB_RS13795 | Not Available | Negative | 3314332 - 3315168 | 29172.1 |
| hypothetical protein | SCAB_RS13800 | Not Available | Negative | 3315261 - 3315482 | 8530.07 |
| hypothetical protein | SCAB_RS46955 | Not Available | Negative | 3315995 - 3316402 | 15151.9 |
| hypothetical protein | SCAB_RS46960 | Not Available | Positive | 3316496 - 3318142 | 60164.5 |
| hypothetical protein | SCAB_RS46965 | Not Available | Positive | 3318297 - 3318848 | 20117.0 |
| hypothetical protein | SCAB_RS13810 | Not Available | Negative | 3318982 - 3319323 | 12300.4 |
| hypothetical protein | SCAB_RS46970 | Not Available | Positive | 3319727 - 3320017 | 10845.3 |
| hypothetical protein | SCAB_RS13815 | Not Available | Positive | 3320123 - 3320476 | 12779.0 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |