Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | SCAB_RS13500 | Not Available | Negative | 3247055 - 3248275 | 39758.8 |
| methylmalonyl co-a mutase-associated gtpase meab | SCAB_RS13505 | Not Available | Negative | 3248451 - 3249407 | 33276.8 |
| acetyl-coa c-acetyltransferase | SCAB_RS13510 | Not Available | Negative | 3249444 - 3250646 | 41078.4 |
| methylmalonyl-coa epimerase | SCAB_RS13515 | Not Available | Positive | 3250799 - 3251239 | 16163.0 |
| polarized growth protein scy | SCAB_RS13520 | Not Available | Positive | 3251516 - 3255367 | 141450.0 |
| cellulose-binding protein | SCAB_RS13525 | Not Available | Positive | 3255626 - 3256564 | 34786.1 |
| abc transporter atp-binding protein | SCAB_RS13530 | Not Available | Positive | 3256844 - 3257812 | 34548.7 |
| abc transporter permease | SCAB_RS13535 | Not Available | Positive | 3257815 - 3258585 | 27267.9 |
| abc transporter atp-binding protein | SCAB_RS13540 | Not Available | Positive | 3258756 - 3260030 | 44238.0 |
| abc transporter permease subunit | SCAB_RS13545 | Not Available | Positive | 3260027 - 3260893 | 30354.3 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |