Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | SCAB_RS12510 | Not Available | Negative | 3009034 - 3009621 | 20787.4 |
| atp-dependent dna helicase recg | SCAB_RS12515 | Not Available | Negative | 3009816 - 3012056 | 80658.8 |
| hsp90 family protein | SCAB_RS12520 | Not Available | Positive | 3012261 - 3014105 | 66683.2 |
| tetratricopeptide repeat protein | SCAB_RS12525 | Not Available | Positive | 3014114 - 3017050 | 105698.0 |
| dak2 domain-containing protein | SCAB_RS12530 | Not Available | Negative | 3017108 - 3018790 | 56707.1 |
| 50s ribosomal protein l28 | SCAB_RS12535 | Not Available | Positive | 3019090 - 3019275 | 6638.99 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | SCAB_RS12540 | Not Available | Negative | 3019440 - 3020261 | 27630.1 |
| thiamine-phosphate kinase | SCAB_RS12545 | Not Available | Negative | 3020258 - 3021223 | 33613.0 |
| lrp/asnc family transcriptional regulator | SCAB_RS12550 | Not Available | Positive | 3021451 - 3021684 | 8204.98 |
| duf3515 domain-containing protein | SCAB_RS12555 | Not Available | Positive | 3021705 - 3022226 | 17654.0 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |