Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SCAB_RS00545 | Not Available | Negative | 128596 - 129168 | 21076.4 |
| type ii toxin-antitoxin system prevent-host-death family antitoxin | SCAB_RS00550 | Not Available | Negative | 129168 - 131735 | 91299.1 |
| hypothetical protein | SCAB_RS00555 | Not Available | Negative | 132086 - 132334 | 8856.4 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS00560 | Not Available | Negative | 132399 - 133436 | 38367.4 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS44255 | Not Available | Negative | 133664 - 133831 | 5740.85 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS44260 | Not Available | Negative | 133833 - 134300 | 18028.7 |
| isazo13 family transposase | SCAB_RS00570 | Not Available | Negative | 134260 - 136341 | 76428.4 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS44265 | Not Available | Positive | 136392 - 136721 | 12696.2 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS00580 | Not Available | Positive | 136717 - 137697 | 32075.9 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS48165 | Not Available | Negative | 137848 - 138076 | 7959.15 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |