Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein | SCAB_RS12110 | Not Available | Negative | 2919439 - 2921127 | 61114.6 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | SCAB_RS12115 | Not Available | Positive | 2921507 - 2924359 | 102089.0 |
| aldehyde dehydrogenase family protein | SCAB_RS12120 | Not Available | Negative | 2924518 - 2925969 | 50914.4 |
| pucr family transcriptional regulator | SCAB_RS12125 | Not Available | Negative | 2926359 - 2927993 | 56360.4 |
| atp-binding protein | SCAB_RS12130 | Not Available | Negative | 2928221 - 2930341 | 75332.9 |
| 4-aminobutyrate--2-oxoglutarate transaminase | SCAB_RS12135 | Not Available | Positive | 2930615 - 2931949 | 46396.8 |
| phosphatase pap2 family protein | SCAB_RS12140 | Not Available | Positive | 2932213 - 2933034 | 28651.1 |
| hypothetical protein | SCAB_RS12145 | Not Available | Negative | 2933142 - 2933606 | 16354.5 |
| nad(p)/fad-dependent oxidoreductase | SCAB_RS12150 | Not Available | Negative | 2933809 - 2935227 | 51924.5 |
| abc transporter permease | SCAB_RS12155 | Not Available | Negative | 2935263 - 2936063 | 29081.4 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |