Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 2854604 - 2854676 | Not Available |
| degt/dnrj/eryc1/strs family aminotransferase | SCAB_RS11875 | Not Available | Negative | 2854772 - 2855434 | 23230.9 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2855547 - 2855663 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2855758 - 2858878 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2859184 - 2860707 | Not Available |
| ribonuclease j | SCAB_RS11895 | Not Available | Negative | 2861222 - 2862907 | 61143.0 |
| hypothetical protein | SCAB_RS49010 | Not Available | Positive | 2862899 - 2863024 | 4700.04 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SCAB_RS11900 | Not Available | Negative | 2863057 - 2863956 | 31372.7 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS48385 | Not Available | Negative | 2864168 - 2864617 | 16894.2 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS48390 | Not Available | Negative | 2864621 - 2865547 | 34288.9 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |