Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SCAB_RS11685 | Not Available | Negative | 2806697 - 2807227 | 18743.6 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | SCAB_RS11690 | Not Available | Negative | 2807329 - 2808267 | 33883.6 |
| hypothetical protein | SCAB_RS11695 | Not Available | Positive | 2808449 - 2808721 | 9225.17 |
| antitoxin | SCAB_RS11700 | Not Available | Positive | 2808746 - 2809069 | 10979.0 |
| class iii extradiol dioxygenase subunit b-like domain-containing protein | SCAB_RS11705 | Not Available | Negative | 2809131 - 2809835 | 23420.0 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | SCAB_RS11710 | Not Available | Negative | 2809941 - 2811464 | 55471.0 |
| mazg nucleotide pyrophosphohydrolase domain-containing protein | SCAB_RS11715 | Not Available | Negative | 2811504 - 2811908 | 14443.0 |
| taxi family trap transporter solute-binding subunit | SCAB_RS11720 | Not Available | Positive | 2812062 - 2813060 | 36434.8 |
| sensor histidine kinase | SCAB_RS11725 | Not Available | Negative | 2813064 - 2814479 | 50431.4 |
| response regulator transcription factor | SCAB_RS11730 | Not Available | Negative | 2814489 - 2815175 | 24876.1 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |