Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pig-l deacetylase family protein | SCAB_RS11090 | Not Available | Positive | 2663701 - 2664348 | 23638.3 |
| nad-dependent epimerase/dehydratase family protein | SCAB_RS11095 | Not Available | Positive | 2664352 - 2665377 | 36309.0 |
| duf4910 domain-containing protein | SCAB_RS11100 | Not Available | Positive | 2665374 - 2666645 | 46532.7 |
| membrane protein | SCAB_RS11105 | Not Available | Positive | 2666642 - 2667940 | 44028.9 |
| glycosyltransferase family 2 protein | SCAB_RS11110 | Not Available | Positive | 2667937 - 2668884 | 35802.1 |
| polysaccharide pyruvyl transferase family protein | SCAB_RS11115 | Not Available | Positive | 2668881 - 2670143 | 44683.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase family protein | SCAB_RS11120 | Not Available | Positive | 2670140 - 2670703 | 20491.2 |
| glutamate-1-semialdehyde 2,1-aminomutase | SCAB_RS11125 | Not Available | Positive | 2670711 - 2672036 | 47231.9 |
| phosphatase pap2 family protein | SCAB_RS11130 | Not Available | Negative | 2672224 - 2672922 | 23179.4 |
| lysr family transcriptional regulator | SCAB_RS11135 | Not Available | Negative | 2673159 - 2674073 | 34031.0 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |