Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wzz/fepe/etk n-terminal domain-containing protein | SCAB_RS11040 | Not Available | Positive | 2648687 - 2650057 | 48113.7 |
| wzz/fepe/etk n-terminal domain-containing protein | SCAB_RS11045 | Not Available | Positive | 2650054 - 2651607 | 54437.4 |
| asparagine synthase (glutamine-hydrolyzing) | SCAB_RS11050 | Not Available | Positive | 2651611 - 2653545 | 71674.6 |
| bi-domain-containing oxidoreductase | SCAB_RS11055 | Not Available | Positive | 2653562 - 2655739 | 76760.6 |
| heparinase ii/iii family protein | SCAB_RS11060 | Not Available | Positive | 2655739 - 2657706 | 71952.7 |
| right-handed parallel beta-helix repeat-containing protein | SCAB_RS11065 | Not Available | Positive | 2657716 - 2659236 | 55907.1 |
| membrane protein | SCAB_RS11070 | Not Available | Positive | 2659238 - 2660470 | 43459.2 |
| glycosyltransferase | SCAB_RS11075 | Not Available | Positive | 2660473 - 2661681 | 42857.5 |
| class i sam-dependent methyltransferase | SCAB_RS11080 | Not Available | Positive | 2661678 - 2662913 | 44728.2 |
| glucose-1-phosphate cytidylyltransferase | SCAB_RS11085 | Not Available | Positive | 2662910 - 2663704 | 29505.2 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |