Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | SCAB_RS10805 | Not Available | Positive | 2590284 - 2591567 | 44464.9 |
| alpha/beta fold hydrolase | SCAB_RS10810 | Not Available | Positive | 2591585 - 2592412 | 30037.6 |
| alpha/beta hydrolase | SCAB_RS10815 | Not Available | Positive | 2592573 - 2593487 | 33166.4 |
| serine hydrolase domain-containing protein | SCAB_RS10820 | Not Available | Positive | 2593604 - 2594044 | 15698.7 |
| luxr c-terminal-related transcriptional regulator | SCAB_RS10830 | Not Available | Positive | 2594484 - 2595365 | 31596.4 |
| alpha/beta hydrolase | SCAB_RS10835 | Not Available | Positive | 2595513 - 2596817 | 45639.4 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS44670 | Not Available | Positive | 2597110 - 2597714 | 21899.1 |
| hypothetical protein | SCAB_RS47535 | Not Available | Positive | 2597896 - 2598087 | 6849.24 |
| vps62-related protein | SCAB_RS10840 | Not Available | Negative | 2598656 - 2599642 | 35878.3 |
| smi1/knr4 family protein | SCAB_RS10845 | Not Available | Negative | 2599794 - 2600411 | 22638.1 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |