Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS47625 | Not Available | Negative | 80990 - 81100 | 4494.25 |
| helix-turn-helix transcriptional regulator | SCAB_RS00330 | Not Available | Negative | 81253 - 82200 | 34988.9 |
| acyl-coa dehydrogenase family protein | SCAB_RS44200 | Not Available | Positive | 82155 - 82682 | 19288.3 |
| 4'-phosphopantetheinyl transferase family protein | SCAB_RS43560 | Not Available | Positive | 82675 - 83475 | 27258.4 |
| hypothetical protein | SCAB_RS48155 | Not Available | Positive | 83504 - 84517 | 35592.7 |
| amino acid adenylation domain-containing protein | SCAB_RS00350 | Not Available | Positive | 84523 - 86145 | 57350.0 |
| flavin reductase family protein | SCAB_RS00355 | Not Available | Positive | 86147 - 86647 | 17514.0 |
| aspartate aminotransferase family protein | SCAB_RS00360 | Not Available | Positive | 86703 - 87962 | 44679.2 |
| lyse family translocator | SCAB_RS00365 | Not Available | Positive | 88085 - 88759 | 23748.2 |
| transposase | SCAB_RS00370 | Not Available | Negative | 88876 - 89442 | 21204.9 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |