Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | SCAB_RS09885 | Not Available | Negative | 2365616 - 2366587 | 35679.5 |
| abc transporter substrate-binding protein | SCAB_RS09890 | Not Available | Negative | 2366587 - 2367903 | 47723.8 |
| glycoside hydrolase family 2 protein | SCAB_RS09895 | Not Available | Positive | 2368064 - 2370430 | 87785.1 |
| laci family dna-binding transcriptional regulator | SCAB_RS09900 | Not Available | Positive | 2370427 - 2371449 | 35652.8 |
| thiolase family protein | SCAB_RS09905 | Not Available | Positive | 2371697 - 2372923 | 43397.7 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | SCAB_RS09910 | Not Available | Positive | 2372920 - 2375055 | 75491.1 |
| hypothetical protein | SCAB_RS09915 | Not Available | Positive | 2375162 - 2375536 | 13340.9 |
| amino acid permease | SCAB_RS09920 | Not Available | Negative | 2375613 - 2377136 | 53783.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SCAB_RS09925 | Not Available | Negative | 2377282 - 2379201 | 68630.3 |
| sugar abc transporter permease | SCAB_RS09930 | Not Available | Negative | 2379541 - 2380872 | 45815.5 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |