Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | SCAB_RS09295 | Not Available | Positive | 2228175 - 2228600 | 14755.5 |
| helix-turn-helix domain-containing protein | SCAB_RS09300 | Not Available | Negative | 2228623 - 2229309 | 24013.8 |
| yihy/virulence factor brkb family protein | SCAB_RS09305 | Not Available | Negative | 2229370 - 2230494 | 40445.5 |
| pls/posa family non-ribosomal peptide synthetase | SCAB_RS09310 | Not Available | Positive | 2231061 - 2233571 | 90233.3 |
| non-ribosomal peptide synthetase | SCAB_RS09315 | Not Available | Positive | 2233586 - 2236048 | 87898.5 |
| taud/tfda family dioxygenase | SCAB_RS09320 | Not Available | Positive | 2236045 - 2237097 | 38242.1 |
| 2,3-diaminopropionate biosynthesis protein sbnb | SCAB_RS09325 | Not Available | Positive | 2237094 - 2238137 | 36863.8 |
| 2,3-diaminopropionate biosynthesis protein sbna | SCAB_RS09330 | Not Available | Positive | 2238184 - 2239194 | 36041.0 |
| acyl-coa dehydrogenase family protein | SCAB_RS09335 | Not Available | Positive | 2239306 - 2240949 | 58682.0 |
| helix-turn-helix domain-containing protein | SCAB_RS09340 | Not Available | Positive | 2241310 - 2242638 | 47636.4 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |