Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fxsxx-cooh cyclophane-containing ripp peptide | SCAB_RS44015 | Not Available | Negative | 2149967 - 2150122 | 5469.25 |
| atp-binding cassette domain-containing protein | SCAB_RS08995 | Not Available | Negative | 2150475 - 2151449 | 34293.9 |
| abc transporter permease | SCAB_RS09000 | Not Available | Negative | 2151458 - 2152534 | 37452.0 |
| sugar abc transporter substrate-binding protein | SCAB_RS09005 | Not Available | Negative | 2152540 - 2153559 | 35355.9 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | SCAB_RS09010 | Not Available | Positive | 2154161 - 2156038 | 66868.0 |
| gntr family transcriptional regulator | SCAB_RS09015 | Not Available | Positive | 2156178 - 2156948 | 27530.8 |
| gfo/idh/moca family protein | SCAB_RS09020 | Not Available | Negative | 2157009 - 2158160 | 40658.8 |
| laci family dna-binding transcriptional regulator | SCAB_RS09025 | Not Available | Positive | 2158272 - 2159288 | 36308.6 |
| alpha/beta fold hydrolase | SCAB_RS09030 | Not Available | Negative | 2159352 - 2160200 | 30374.2 |
| marr family transcriptional regulator | SCAB_RS09035 | Not Available | Positive | 2160311 - 2160796 | 16479.6 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |