Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SCAB_RS23020 | Not Available | Negative | 5404296 - 5404475 | 5537.03 |
| Terminase large subunit | SCAB_RS23025 | Not Available | Negative | 5404457 - 5405995 | 55570.7 |
| hypothetical protein | SCAB_RS23030 | Not Available | Negative | 5405976 - 5406251 | 9370.95 |
| Hypothetical protein | SCAB_RS47410 | Not Available | Negative | 5406262 - 5406501 | 8491.15 |
| Polynucleotide kinase | SCAB_RS23040 | Not Available | Negative | 5407178 - 5407609 | 16026.4 |
| Hnh endonuclease | SCAB_RS23045 | Not Available | Negative | 5407818 - 5408108 | 10853.0 |
| hypothetical protein | SCAB_RS23050 | Not Available | Negative | 5408121 - 5408375 | 9271.53 |
| hypothetical protein | SCAB_RS23055 | Not Available | Negative | 5408439 - 5408666 | 8161.8 |
| hypothetical protein | SCAB_RS23060 | Not Available | Negative | 5408685 - 5408978 | 11234.4 |
| hypothetical protein | SCAB_RS23065 | Not Available | Negative | 5409163 - 5409375 | 7714.5 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |