Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | SCAB_RS08490 | Not Available | Negative | 2023101 - 2023931 | 30134.8 |
| hypothetical protein | SCAB_RS08495 | Not Available | Positive | 2024229 - 2024900 | 23187.2 |
| ncs1 family nucleobase:cation symporter-1 | SCAB_RS08500 | Not Available | Negative | 2024950 - 2026518 | 56087.8 |
| tigr03842 family llm class f420-dependent oxidoreductase | SCAB_RS08505 | Not Available | Negative | 2026736 - 2027755 | 36962.9 |
| dihydropyrimidinase | SCAB_RS08510 | Not Available | Negative | 2027767 - 2029170 | 50848.1 |
| nitrilase-related carbon-nitrogen hydrolase | SCAB_RS08515 | Not Available | Negative | 2029351 - 2030193 | 31724.5 |
| pucr family transcriptional regulator | SCAB_RS08520 | Not Available | Negative | 2030349 - 2031926 | 56256.6 |
| aspartate aminotransferase family protein | SCAB_RS08525 | Not Available | Negative | 2031958 - 2033244 | 45831.7 |
| nitrilase-related carbon-nitrogen hydrolase | SCAB_RS08530 | Not Available | Negative | 2033328 - 2034170 | 31661.1 |
| hypothetical protein | SCAB_RS08535 | Not Available | Negative | 2034405 - 2035817 | 51176.2 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |