Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr03086 family metal-binding protein | SCAB_RS08140 | Not Available | Negative | 1947274 - 1947861 | 20929.6 |
| duf6158 family protein | SCAB_RS08145 | Not Available | Negative | 1947858 - 1948091 | 8899.57 |
| abc-f family atp-binding cassette domain-containing protein | SCAB_RS08150 | Not Available | Negative | 1948187 - 1949806 | 60037.4 |
| bifunctional phosphatase pap2/diacylglycerol kinase family protein | SCAB_RS08155 | Not Available | Positive | 1949960 - 1951453 | 52695.5 |
| class i sam-dependent methyltransferase | SCAB_RS08160 | Not Available | Positive | 1951579 - 1952400 | 29893.1 |
| hypothetical protein | SCAB_RS08165 | Not Available | Positive | 1952444 - 1952614 | 6246.11 |
| gas vesicle protein k | SCAB_RS08170 | Not Available | Negative | 1952635 - 1952916 | 10931.3 |
| gas vesicle protein | SCAB_RS08175 | Not Available | Negative | 1952913 - 1953101 | 6695.22 |
| gvpl/gvpf family gas vesicle protein | SCAB_RS08180 | Not Available | Negative | 1953098 - 1953883 | 29020.9 |
| gas vesicle protein | SCAB_RS08185 | Not Available | Negative | 1953880 - 1954248 | 13595.1 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |