Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp-dependent synthetase/ligase | SCAB_RS07995 | Not Available | Positive | 1909360 - 1911186 | 66974.3 |
| hypothetical protein | SCAB_RS08000 | Not Available | Negative | 1911223 - 1912005 | 28461.9 |
| aldo/keto reductase | SCAB_RS08005 | Not Available | Positive | 1912237 - 1913073 | 30414.0 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS08010 | Not Available | Negative | 1913173 - 1913911 | 25631.7 |
| class i sam-dependent methyltransferase | SCAB_RS08015 | Not Available | Negative | 1914030 - 1914926 | 31793.5 |
| dihydrofolate reductase family protein | SCAB_RS08020 | Not Available | Negative | 1915066 - 1915662 | 20943.8 |
| glycoside hydrolase family 6 protein | SCAB_RS08025 | Not Available | Negative | 1915844 - 1917556 | 59548.9 |
| glycoside hydrolase family 48 protein | SCAB_RS08030 | Not Available | Positive | 1917936 - 1920851 | 103778.0 |
| cellulose binding domain-containing protein | SCAB_RS08035 | Not Available | Positive | 1920980 - 1923646 | 92999.8 |
| endonuclease/exonuclease/phosphatase family protein | SCAB_RS08040 | Not Available | Positive | 1923829 - 1924746 | 33617.8 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |