Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter small subunit | SCAB_RS47660 | Not Available | Negative | 1896681 - 1896818 | 5021.03 |
| ofa family mfs transporter | SCAB_RS07950 | Not Available | Negative | 1896784 - 1898118 | 46932.6 |
| 2-dehydropantoate 2-reductase | SCAB_RS07955 | Not Available | Positive | 1898391 - 1899362 | 34008.2 |
| molybdopterin oxidoreductase family protein | SCAB_RS07960 | Not Available | Positive | 1899373 - 1901298 | 71103.0 |
| nadh-ubiquinone oxidoreductase-f iron-sulfur binding region domain-containing protein | SCAB_RS07965 | Not Available | Positive | 1901305 - 1903137 | 64092.3 |
| 2fe-2s iron-sulfur cluster-binding protein | SCAB_RS07970 | Not Available | Positive | 1903134 - 1903994 | 31273.9 |
| formate dehydrogenase accessory sulfurtransferase fdhd | SCAB_RS07975 | Not Available | Positive | 1904003 - 1904872 | 30351.3 |
| duf4185 domain-containing protein | SCAB_RS07980 | Not Available | Positive | 1905026 - 1906261 | 43653.3 |
| bile acid:sodium symporter family protein | SCAB_RS07985 | Not Available | Negative | 1906200 - 1907243 | 36773.9 |
| lysr substrate-binding domain-containing protein | SCAB_RS07990 | Not Available | Positive | 1907385 - 1908260 | 31956.5 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |